BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB029H08SP1|AL429131
(900 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1268 1770 0.0
>3x_Contig1268
Length = 6710
Score = 1770 bits (893), Expect = 0.0
Identities = 900/901 (99%), Gaps = 1/901 (0%)
Strand = Plus / Minus
Query: 1 aatatcctaccatttgcgcacaatggatttgtatattccatcgtcaaattagagtcccac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1271 aatatcctaccatttgcgcacaatggatttgtatattccatcgtcaaattagagtcccac 1212
Query: 61 agagatactctaccaatatacctggacttgaaacctgacgttcaatacattatttctggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1211 agagatactctaccaatatacctggacttgaaacctgacgttcaatacattatttctggt 1152
Query: 121 ggtggagatggcgtttccaagttatggtcattgcatgtagatccagccgatgatcaatcg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1151 ggtggagatggcgtttccaagttatggtcattgcatgtagatccagccgatgatcaatcg 1092
Query: 181 gtcaaaatctgtttggttaccgaattagataatgatgaaccagttttaacacaattcctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1091 gtcaaaatctgtttggttaccgaattagataatgatgaaccagttttaacacaattcctg 1032
Query: 241 gaattccctttcctctacgtaggactcacggacggtttattgaaaatttgggatttgaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1031 gaattccctttcctctacgtaggactcacggacggtttattgaaaatttgggatttgaac 972
Query: 301 accaatcaatcggtaagtaccttacagagcgatgatccaagtgatatcacctcactggca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 971 accaatcaatcggtaagtaccttacagagcgatgatccaagtgatatcacctcactggca 912
Query: 361 gtttgtcaagatcagattttcgcctctcaaagaaaaggcgttactaaattcttccaggat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 911 gtttgtcaagatcagattttcgcctctcaaagaaaaggcgttactaaattcttccaggat 852
Query: 421 gacgtttatcattggcaagggcatcaaggaagtattttaagctctgagataatttgcaaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 851 gacgtttatcattggcaagggcatcaaggaagtattttaagctctgagataatttgcaaa 792
Query: 481 agttgtaccaaaaatccgtatacaaggctcgtcacaggtggtaatgacggttccttgatc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 791 agttgtaccaaaaatccgtatacaaggctcgtcacaggtggtaatgacggttccttgatc 732
Query: 541 ctttggaatatcacagacttaatcaataatggccaagaggatatagatccgatattccat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 ctttggaatatcacagacttaatcaataatggccaagaggatatagatccgatattccat 672
Query: 601 agtcatgaagctactgccaaggaccgtcataattcttggactgctacgaatttggataat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 agtcatgaagctactgccaaggaccgtcataattcttggactgctacgaatttggataat 612
Query: 661 gaccatatgcttcataatttgagcactcttattcattttcaaactgtttctagaaaagct 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 gaccatatgcttcataatttgagcactcttattcattttcaaactgtttctagaaaagct 552
Query: 721 gatacaagacacttacttgaaggtcgtcgttgtgc-actcacctccagcagctattttat 779
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 551 gatacaagacacttacttgaaggtcgtcgttgtgcaactcacctccagcagctattttat 492
Query: 780 aaactaggagcaagaaattgtgatttaattcctgttcacaatgaaggaaatcccatcgta 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 aaactaggagcaagaaattgtgatttaattcctgttcacaatgaaggaaatcccatcgta 432
Query: 840 tattctgcattctctggtaactccagaaatgtagagaaaaggaagaaaatagtatggtac 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 tattctgcattctctggtaactccagaaatgtagagaaaaggaagaaaatagtatggtac 372
Query: 900 g 900
|
Sbjct: 371 g 371
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6657
Number of Sequences: 1807
Number of extensions: 6657
Number of successful extensions: 49
Number of sequences better than 1.0e-20: 1
length of query: 900
length of database: 10,358,551
effective HSP length: 16
effective length of query: 884
effective length of database: 10,329,639
effective search space: 9131400876
effective search space used: 9131400876
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)